IL_7LS2_013

3D structure

PDB id

7LS2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome from mouse bound to eEF2 (Class I)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GCUCGUGG*CGGC

Length

12 nucleotides

Bulged bases

7LS2|1|A2|C|183, 7LS2|1|A2|U|184

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7LS2|1|A2|G|182
7LS2|1|A2|C|183
7LS2|1|A2|U|184
7LS2|1|A2|C|185
7LS2|1|A2|G|186
7LS2|1|A2|U|187
7LS2|1|A2|G|188
7LS2|1|A2|G|189
*
7LS2|1|A2|C|252
7LS2|1|A2|G|253
7LS2|1|A2|G|254
7LS2|1|A2|C|255

Current chains

Chain A2

28S rRNA

Nearby chains

Chain C2

5.8S ribosomal RNA; 5.8S rRNA

Chain F1

60S ribosomal protein L13

Chain b2

60S ribosomal protein L35

Chain d2

60S ribosomal protein L37