IL_7LS2_024

3D structure

PDB id

7LS2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome from mouse bound to eEF2 (Class I)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GAUUCAAC*GCGCACUUCC

Length

18 nucleotides

Bulged bases

7LS2|1|A2|C|694

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7LS2|1|A2|G|465
7LS2|1|A2|A|466
7LS2|1|A2|U|467
7LS2|1|A2|U|468
7LS2|1|A2|C|469
7LS2|1|A2|A|470
7LS2|1|A2|A|471
7LS2|1|A2|C|472
*
7LS2|1|A2|G|689
7LS2|1|A2|C|690
7LS2|1|A2|G|691
7LS2|1|A2|C|692
7LS2|1|A2|A|693
7LS2|1|A2|C|694
7LS2|1|A2|U|695
7LS2|1|A2|U|696
7LS2|1|A2|C|697
7LS2|1|A2|C|698

Current chains

Chain A2

28S rRNA

Nearby chains

Chain H2

60S ribosomal protein L6

Chain k2

60S ribosomal protein L28