IL_7LS2_106

3D structure

PDB id

7LS2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome from mouse bound to eEF2 (Class I)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CUGGAAUG*CGAGAGAG

Length

16 nucleotides

Bulged bases

7LS2|1|A2|U|2416, 7LS2|1|A2|A|2429

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7LS2|1|A2|C|2410
7LS2|1|A2|U|2411
7LS2|1|A2|G|2412
7LS2|1|A2|G|2413
7LS2|1|A2|A|2414
7LS2|1|A2|A|2415
7LS2|1|A2|U|2416
7LS2|1|A2|G|2417
*
7LS2|1|A2|C|2427
7LS2|1|A2|G|2428
7LS2|1|A2|A|2429
7LS2|1|A2|G|2430
7LS2|1|A2|A|2431
7LS2|1|A2|G|2432
7LS2|1|A2|A|2433
7LS2|1|A2|G|2434

Current chains

Chain A2

28S rRNA

Nearby chains

Chain L2

60S ribosomal protein L19

Chain N3

40S ribosomal protein S13

Chain T2

60S ribosomal protein L27

Chain W2

60S ribosomal protein L30

Chain a2

60S ribosomal protein L34

Chain j2

60S ribosomal protein L37a