IL_7LS2_120

3D structure

PDB id

7LS2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome from mouse bound to eEF2 (Class I)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UGCUC*GGUAAA

Length

11 nucleotides

Bulged bases

7LS2|1|A2|A|3402, 7LS2|1|A2|A|3403

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7LS2|1|A2|U|3360
7LS2|1|A2|G|3361
7LS2|1|A2|C|3362
7LS2|1|A2|U|3363
7LS2|1|A2|C|3364
*
7LS2|1|A2|G|3399
7LS2|1|A2|G|3400
7LS2|1|A2|U|3401
7LS2|1|A2|A|3402
7LS2|1|A2|A|3403
7LS2|1|A2|A|3404

Current chains

Chain A2

28S rRNA

Nearby chains

Chain D2

60S ribosomal protein L8

Chain m2

Small subunit ribosomal RNA; SSU rRNA