IL_7LS2_122

3D structure

PDB id

7LS2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome from mouse bound to eEF2 (Class I)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

G(PSU)CA(A2M)AGU*AAUGAAGC

Length

16 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU, A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7LS2|1|A2|G|3370
7LS2|1|A2|PSU|3371
7LS2|1|A2|C|3372
7LS2|1|A2|A|3373
7LS2|1|A2|A2M|3374
7LS2|1|A2|A|3375
7LS2|1|A2|G|3376
7LS2|1|A2|U|3377
*
7LS2|1|A2|A|3388
7LS2|1|A2|A|3389
7LS2|1|A2|U|3390
7LS2|1|A2|G|3391
7LS2|1|A2|A|3392
7LS2|1|A2|A|3393
7LS2|1|A2|G|3394
7LS2|1|A2|C|3395

Current chains

Chain A2

28S rRNA

Nearby chains

Chain D2

60S ribosomal protein L8

Chain c2

60S ribosomal protein L36

Chain i2

60S ribosomal protein L36a

Chain n2

Transfer RNA; tRNA