IL_7LS2_156

3D structure

PDB id

7LS2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome from mouse bound to eEF2 (Class I)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UGCCAU*AGGCGGA

Length

13 nucleotides

Bulged bases

7LS2|1|A2|C|4372

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7LS2|1|A2|U|4232
7LS2|1|A2|G|4233
7LS2|1|A2|C|4234
7LS2|1|A2|C|4235
7LS2|1|A2|A|4236
7LS2|1|A2|U|4237
*
7LS2|1|A2|A|4369
7LS2|1|A2|G|4370
7LS2|1|A2|G|4371
7LS2|1|A2|C|4372
7LS2|1|A2|G|4373
7LS2|1|A2|G|4374
7LS2|1|A2|A|4375

Current chains

Chain A2

28S rRNA

Nearby chains

Chain E2

60S ribosomal protein L3

Chain I2

60S ribosomal protein L13a