IL_7LS2_205

3D structure

PDB id

7LS2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome from mouse bound to eEF2 (Class I)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CAGAUG*CUAG

Length

10 nucleotides

Bulged bases

7LS2|1|m2|A|228

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7LS2|1|m2|C|225
7LS2|1|m2|A|226
7LS2|1|m2|G|227
7LS2|1|m2|A|228
7LS2|1|m2|U|289
7LS2|1|m2|G|290
*
7LS2|1|m2|C|297
7LS2|1|m2|U|298
7LS2|1|m2|A|299
7LS2|1|m2|G|300

Current chains

Chain m2

18S rRNA

Nearby chains

Chain K3

40S ribosomal protein S6

Chain r2

40S ribosomal protein S4, X isoform

Chain u

40S ribosomal protein S8

Chain w2

40S ribosomal protein S11