IL_7LS2_209

3D structure

PDB id

7LS2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome from mouse bound to eEF2 (Class I)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UUUCGAUG*CAUG

Length

12 nucleotides

Bulged bases

7LS2|1|m2|U|370, 7LS2|1|m2|C|371

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7LS2|1|m2|U|368
7LS2|1|m2|U|369
7LS2|1|m2|U|370
7LS2|1|m2|C|371
7LS2|1|m2|G|372
7LS2|1|m2|A|373
7LS2|1|m2|U|374
7LS2|1|m2|G|375
*
7LS2|1|m2|C|393
7LS2|1|m2|A|394
7LS2|1|m2|U|395
7LS2|1|m2|G|396

Current chains

Chain m2

18S rRNA

Nearby chains

Chain A2

Large subunit ribosomal RNA; LSU rRNA

Chain L2

60S ribosomal protein L19

Chain u

40S ribosomal protein S8

Chain w2

40S ribosomal protein S11