IL_7LS2_218

3D structure

PDB id

7LS2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome from mouse bound to eEF2 (Class I)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CUC*GAGG

Length

7 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7LS2_218 not in the Motif Atlas

Geometric match to IL_4N0T_004

Geometric discrepancy: 0.2044

The information below is about IL_4N0T_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_32983.3

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

9

Unit IDs

7LS2|1|m2|C|539
7LS2|1|m2|U|540
7LS2|1|m2|C|541
*
7LS2|1|m2|G|546
7LS2|1|m2|A|547
7LS2|1|m2|G|548
7LS2|1|m2|G|549

Current chains

Chain m2

18S rRNA

Nearby chains