IL_7LS2_241
3D structure
- PDB id
- 7LS2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome from mouse bound to eEF2 (Class I)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- AGGUUC*GUU
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7LS2_241 not in the Motif Atlas
- Geometric match to IL_4V88_435
- Geometric discrepancy: 0.236
- The information below is about IL_4V88_435
- Detailed Annotation
- Other IL
- Broad Annotation
- Other IL
- Motif group
- IL_22046.1
- Basepair signature
- cWW-L-cWW-L-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
7LS2|1|m2|A|1044
7LS2|1|m2|G|1045
7LS2|1|m2|G|1046
7LS2|1|m2|U|1047
7LS2|1|m2|U|1048
7LS2|1|m2|C|1049
*
7LS2|1|m2|G|1073
7LS2|1|m2|U|1074
7LS2|1|m2|U|1075
Current chains
- Chain m2
- 18S rRNA
Nearby chains
- Chain A2
- Large subunit ribosomal RNA; LSU rRNA
- Chain D2
- 60S ribosomal protein L8
- Chain F3
- 40S ribosomal protein S26
- Chain O3
- 40S ribosomal protein S14
- Chain j2
- 60S ribosomal protein L37a
Coloring options: