IL_7LS2_253
3D structure
- PDB id
- 7LS2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome from mouse bound to eEF2 (Class I)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GCCC*GUC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7LS2_253 not in the Motif Atlas
- Geometric match to IL_4V9F_053
- Geometric discrepancy: 0.3359
- The information below is about IL_4V9F_053
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_49140.2
- Basepair signature
- cWW-cWW-L-cWW
- Number of instances in this motif group
- 5
Unit IDs
7LS2|1|m2|G|1272
7LS2|1|m2|C|1273
7LS2|1|m2|C|1274
7LS2|1|m2|C|1275
*
7LS2|1|m2|G|1512
7LS2|1|m2|U|1513
7LS2|1|m2|C|1514
Current chains
- Chain m2
- 18S rRNA
Nearby chains
- Chain H3
- 40S ribosomal protein S29
- Chain U3
- Ubiquitin-40S ribosomal protein S27a
- Chain v2
- 40S ribosomal protein S10
- Chain x2
- 40S ribosomal protein S15
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