IL_7LS2_254

3D structure

PDB id

7LS2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome from mouse bound to eEF2 (Class I)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGACAGGAUUG*CUCGAUUCC

Length

20 nucleotides

Bulged bases

7LS2|1|m2|G|1287

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7LS2|1|m2|G|1282
7LS2|1|m2|G|1283
7LS2|1|m2|A|1284
7LS2|1|m2|C|1285
7LS2|1|m2|A|1286
7LS2|1|m2|G|1287
7LS2|1|m2|G|1288
7LS2|1|m2|A|1289
7LS2|1|m2|U|1290
7LS2|1|m2|U|1291
7LS2|1|m2|G|1292
*
7LS2|1|m2|C|1311
7LS2|1|m2|U|1312
7LS2|1|m2|C|1313
7LS2|1|m2|G|1314
7LS2|1|m2|A|1315
7LS2|1|m2|U|1316
7LS2|1|m2|U|1317
7LS2|1|m2|C|1318
7LS2|1|m2|C|1319

Current chains

Chain m2

18S rRNA

Nearby chains

Chain H3

40S ribosomal protein S29

Chain M3

40S ribosomal protein S12

Chain U3

Ubiquitin-40S ribosomal protein S27a

Chain v2

40S ribosomal protein S10