IL_7LS2_268

3D structure

PDB id

7LS2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome from mouse bound to eEF2 (Class I)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GUGCCUACC*GUAACC

Length

15 nucleotides

Bulged bases

7LS2|1|m2|A|1582, 7LS2|1|m2|C|1583

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7LS2|1|m2|G|1552
7LS2|1|m2|U|1553
7LS2|1|m2|G|1554
7LS2|1|m2|C|1555
7LS2|1|m2|C|1556
7LS2|1|m2|U|1557
7LS2|1|m2|A|1558
7LS2|1|m2|C|1559
7LS2|1|m2|C|1560
*
7LS2|1|m2|G|1579
7LS2|1|m2|U|1580
7LS2|1|m2|A|1581
7LS2|1|m2|A|1582
7LS2|1|m2|C|1583
7LS2|1|m2|C|1584

Current chains

Chain m2

18S rRNA

Nearby chains

Chain C3

40S ribosomal protein S20

Chain H3

40S ribosomal protein S29

Chain q2

40S ribosomal protein S3

Chain v2

40S ribosomal protein S10