IL_7LS2_272
3D structure
- PDB id
- 7LS2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome from mouse bound to eEF2 (Class I)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CGCU*AAAAG
- Length
- 9 nucleotides
- Bulged bases
- 7LS2|1|m2|A|1827
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7LS2_272 not in the Motif Atlas
- Homologous match to IL_8C3A_473
- Geometric discrepancy: 0.2704
- The information below is about IL_8C3A_473
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_50458.2
- Basepair signature
- cWW-cWW-L-R-L-cWW
- Number of instances in this motif group
- 4
Unit IDs
7LS2|1|m2|C|1710
7LS2|1|m2|G|1711
7LS2|1|m2|C|1712
7LS2|1|m2|U|1713
*
7LS2|1|m2|A|1824
7LS2|1|m2|A|1825
7LS2|1|m2|A|1826
7LS2|1|m2|A|1827
7LS2|1|m2|G|1828
Current chains
- Chain m2
- 18S rRNA
Nearby chains
- Chain A
- Isoform 3 of Plasminogen activator inhibitor 1 RNA-binding protein
- Chain A2
- Large subunit ribosomal RNA; LSU rRNA
- Chain E3
- 40S ribosomal protein S23
- Chain h2
- 60S ribosomal protein L41
- Chain m
- Elongation factor 2
Coloring options: