IL_7LS2_290

3D structure

PDB id

7LS2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome from mouse bound to eEF2 (Class I)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CAGGG*CGCCGUG

Length

12 nucleotides

Bulged bases

7LS2|1|A2|G|1173, 7LS2|1|A2|C|1192

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7LS2|1|A2|C|1171
7LS2|1|A2|A|1172
7LS2|1|A2|G|1173
7LS2|1|A2|G|1174
7LS2|1|A2|G|1175
*
7LS2|1|A2|C|1190
7LS2|1|A2|G|1191
7LS2|1|A2|C|1192
7LS2|1|A2|C|1193
7LS2|1|A2|G|1194
7LS2|1|A2|U|1195
7LS2|1|A2|G|1196

Current chains

Chain A2

28S rRNA

Nearby chains

Chain F1

60S ribosomal protein L13

Chain F2

60S ribosomal protein L4

Chain H1

60S ribosomal protein L15

Chain U2

60S ribosomal protein L27a