IL_7LS2_297

3D structure

PDB id

7LS2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome from mouse bound to eEF2 (Class I)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UCUUG*CAA

Length

8 nucleotides

Bulged bases

7LS2|1|A2|U|1559

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7LS2_297 not in the Motif Atlas

Geometric match to IL_8C3A_092

Geometric discrepancy: 0.3977

The information below is about IL_8C3A_092

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_58579.1

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

6

Unit IDs

7LS2|1|A2|U|1556
7LS2|1|A2|C|1557
7LS2|1|A2|U|1558
7LS2|1|A2|U|1559
7LS2|1|A2|G|1560
*
7LS2|1|A2|C|1576
7LS2|1|A2|A|1577
7LS2|1|A2|A|1578

Current chains

Chain A2

28S rRNA

Nearby chains

Chain D1

60S ribosomal protein L10-like

Chain G2

60S ribosomal protein L5