IL_7LS2_301

3D structure

PDB id

7LS2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome from mouse bound to eEF2 (Class I)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CGAUCC*GGGGAG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7LS2|1|A2|C|2344
7LS2|1|A2|G|2345
7LS2|1|A2|A|2346
7LS2|1|A2|U|2347
7LS2|1|A2|C|2348
7LS2|1|A2|C|2349
*
7LS2|1|A2|G|2506
7LS2|1|A2|G|2507
7LS2|1|A2|G|2508
7LS2|1|A2|G|2509
7LS2|1|A2|A|2510
7LS2|1|A2|G|2511

Current chains

Chain A2

28S rRNA

Nearby chains

Chain B1

60S ribosomal protein L7a

Chain D2

60S ribosomal protein L8

Chain T2

60S ribosomal protein L27

Chain a2

60S ribosomal protein L34