IL_7LS2_311

3D structure

PDB id

7LS2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome from mouse bound to eEF2 (Class I)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CAUUGUG*(B8T)ACCAAGCG

Length

16 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: B8T

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7LS2|1|A2|C|4118
7LS2|1|A2|A|4119
7LS2|1|A2|U|4120
7LS2|1|A2|U|4121
7LS2|1|A2|G|4122
7LS2|1|A2|U|4123
7LS2|1|A2|G|4124
*
7LS2|1|A2|B8T|4135
7LS2|1|A2|A|4136
7LS2|1|A2|C|4137
7LS2|1|A2|C|4138
7LS2|1|A2|A|4139
7LS2|1|A2|A|4140
7LS2|1|A2|G|4141
7LS2|1|A2|C|4142
7LS2|1|A2|G|4143

Current chains

Chain A2

28S rRNA

Nearby chains

Chain C1

60S ribosomal protein L9

Chain E2

60S ribosomal protein L3

Chain I2

60S ribosomal protein L13a

Chain P2

60S ribosomal protein L23

Chain g2

Ubiquitin-60S ribosomal protein L40