IL_7LS2_329

3D structure

PDB id

7LS2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome from mouse bound to eEF2 (Class I)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGGGAGUAUGG*CUGAAACUU

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7LS2|1|m2|G|1168
7LS2|1|m2|G|1169
7LS2|1|m2|G|1170
7LS2|1|m2|G|1171
7LS2|1|m2|A|1172
7LS2|1|m2|G|1173
7LS2|1|m2|U|1174
7LS2|1|m2|A|1175
7LS2|1|m2|U|1176
7LS2|1|m2|G|1177
7LS2|1|m2|G|1178
*
7LS2|1|m2|C|1187
7LS2|1|m2|U|1188
7LS2|1|m2|G|1189
7LS2|1|m2|A|1190
7LS2|1|m2|A|1191
7LS2|1|m2|A|1192
7LS2|1|m2|C|1193
7LS2|1|m2|U|1194
7LS2|1|m2|U|1195

Current chains

Chain m2

18S rRNA

Nearby chains

Chain A2

Large subunit ribosomal RNA; LSU rRNA

Chain E3

40S ribosomal protein S23

Chain h2

60S ribosomal protein L41