IL_7LS2_337

3D structure

PDB id

7LS2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome from mouse bound to eEF2 (Class I)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGUGUAGAAUAAGU*ACUAC

Length

19 nucleotides

Bulged bases

7LS2|1|A2|G|3612, 7LS2|1|A2|U|3613, 7LS2|1|A2|A|3616, 7LS2|1|A2|A|3618, 7LS2|1|A2|A|3619, 7LS2|1|A2|U|3620

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7LS2|1|A2|G|3611
7LS2|1|A2|G|3612
7LS2|1|A2|U|3613
7LS2|1|A2|G|3614
7LS2|1|A2|U|3615
7LS2|1|A2|A|3616
7LS2|1|A2|G|3617
7LS2|1|A2|A|3618
7LS2|1|A2|A|3619
7LS2|1|A2|U|3620
7LS2|1|A2|A|3621
7LS2|1|A2|A|3622
7LS2|1|A2|G|3623
7LS2|1|A2|U|3624
*
7LS2|1|A2|A|3703
7LS2|1|A2|C|3704
7LS2|1|A2|U|3705
7LS2|1|A2|A|3706
7LS2|1|A2|C|3707

Current chains

Chain A2

28S rRNA

Nearby chains

Chain L1

60S ribosomal protein L10a

Chain n2

Transfer RNA; tRNA