IL_7LV0_031

3D structure

PDB id

7LV0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation rotated ribosome +1-frameshifting(CCC-A) complex (Structure Irot-FS)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GGGG*CUUAC

Length

9 nucleotides

Bulged bases

7LV0|1|1|A|896

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7LV0_031 not in the Motif Atlas

Geometric match to IL_3WBM_002

Geometric discrepancy: 0.3872

The information below is about IL_3WBM_002

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_15225.2

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

39

Unit IDs

7LV0|1|1|G|880
7LV0|1|1|G|881
7LV0|1|1|G|882
7LV0|1|1|G|883
*
7LV0|1|1|C|893
7LV0|1|1|U|894
7LV0|1|1|U|895
7LV0|1|1|A|896
7LV0|1|1|C|897

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain 5

Transfer RNA; tRNA