IL_7LV0_033

3D structure

PDB id

7LV0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation rotated ribosome +1-frameshifting(CCC-A) complex (Structure Irot-FS)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CUAAG*CGAAG

Length

10 nucleotides

Bulged bases

7LV0|1|1|A|1156

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7LV0_033 not in the Motif Atlas

Homologous match to IL_4WF9_036

Geometric discrepancy: 0.1177

The information below is about IL_4WF9_036

Detailed Annotation

UAA/GAN

Broad Annotation

No text annotation

Motif group

IL_08938.1

Basepair signature

cWW-tWH-L-tHS-cWW

Number of instances in this motif group

22

Unit IDs

7LV0|1|1|C|998
7LV0|1|1|U|999
7LV0|1|1|A|1000
7LV0|1|1|A|1001
7LV0|1|1|G|1002
*
7LV0|1|1|C|1153
7LV0|1|1|G|1154
7LV0|1|1|A|1155
7LV0|1|1|A|1156
7LV0|1|1|G|1157

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain 2

5S ribosomal RNA; 5S rRNA

Chain q

50S ribosomal protein L20

Chain r

50S ribosomal protein L21

Chain z

50S ribosomal protein L30