IL_7LV0_111

3D structure

PDB id

7LV0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation rotated ribosome +1-frameshifting(CCC-A) complex (Structure Irot-FS)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UGUAAG*UUGAG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7LV0_111 not in the Motif Atlas

Homologous match to IL_7RQB_110

Geometric discrepancy: 0.1651

The information below is about IL_7RQB_110

Detailed Annotation

tHS double platform

Broad Annotation

No text annotation

Motif group

IL_83162.5

Basepair signature

cWW-tSH-L-tHH-L-cWW

Number of instances in this motif group

7

Unit IDs

7LV0|1|1|U|2847
7LV0|1|1|G|2848
7LV0|1|1|U|2849
7LV0|1|1|A|2850
7LV0|1|1|A|2851
7LV0|1|1|G|2852
*
7LV0|1|1|U|2865
7LV0|1|1|U|2866
7LV0|1|1|G|2867
7LV0|1|1|A|2868
7LV0|1|1|G|2869

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain n

50S ribosomal protein L17

Chain p

50S ribosomal protein L19