IL_7LV0_175

3D structure

PDB id

7LV0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation rotated ribosome +1-frameshifting(CCC-A) complex (Structure Irot-FS)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GCCC*GUAAC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7LV0_175 not in the Motif Atlas

Geometric match to IL_4V88_464

Geometric discrepancy: 0.138

The information below is about IL_4V88_464

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_65718.1

Basepair signature

cWW-cSH-cWS-cWW-cWW

Number of instances in this motif group

5

Unit IDs

7LV0|1|3|G|1401
7LV0|1|3|C|1402
7LV0|1|3|C|1403
7LV0|1|3|C|1404
*
7LV0|1|3|G|1497
7LV0|1|3|U|1498
7LV0|1|3|A|1499
7LV0|1|3|A|1500
7LV0|1|3|C|1501

Current chains

Chain 3

16S ribosomal RNA

Nearby chains

Chain 1

Large subunit ribosomal RNA; LSU rRNA

Chain 4

mRNA

Chain 6

Transfer RNA; tRNA