IL_7LVK_119

3D structure

PDB id

7LVK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cfr-modified 50S subunit from Escherichia coli

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

UUAAUUGAUG*UUGAUCGAAG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7LVK_119 not in the Motif Atlas

Homologous match to IL_5J7L_387

Geometric discrepancy: 0.0629

The information below is about IL_5J7L_387

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61249.1

Basepair signature

cWW-L-R-L-R-tHS-cWW-cWW-tSH-tHS-cWW-cWW

Number of instances in this motif group

1

Unit IDs

7LVK|1|I|U|1851
7LVK|1|I|U|1852
7LVK|1|I|A|1853
7LVK|1|I|A|1854
7LVK|1|I|U|1855
7LVK|1|I|U|1856
7LVK|1|I|G|1857
7LVK|1|I|A|1858
7LVK|1|I|U|1859
7LVK|1|I|G|1860
*
7LVK|1|I|U|1882
7LVK|1|I|U|1883
7LVK|1|I|G|1884
7LVK|1|I|A|1885
7LVK|1|I|U|1886
7LVK|1|I|C|1887
7LVK|1|I|G|1888
7LVK|1|I|A|1889
7LVK|1|I|A|1890
7LVK|1|I|G|1891

Current chains

Chain I

23S rRNA

Nearby chains