IL_7LVK_126

3D structure

PDB id

7LVK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cfr-modified 50S subunit from Escherichia coli

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

(PSU)GA*UG

Length

5 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7LVK_126 not in the Motif Atlas

Homologous match to IL_5J7L_393

Geometric discrepancy: 0.0953

The information below is about IL_5J7L_393

Detailed Annotation

Major groove platform

Broad Annotation

No text annotation

Motif group

IL_07039.3

Basepair signature

cWW-L-cWW

Number of instances in this motif group

16

Unit IDs

7LVK|1|I|PSU|2457
7LVK|1|I|G|2458
7LVK|1|I|A|2459
*
7LVK|1|I|U|2493
7LVK|1|I|G|2494

Current chains

Chain I

23S rRNA

Nearby chains

Chain U

50S ribosomal protein L16