IL_7M4U_048

3D structure

PDB id

7M4U (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-Eravacycline complex: 30S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.71 Å

Loop

Sequence

UGCAU*AUG

Length

8 nucleotides

Bulged bases

7M4U|1|a|C|1051

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7M4U_048 not in the Motif Atlas

Homologous match to IL_4LFB_044

Geometric discrepancy: 0.095

The information below is about IL_4LFB_044

Detailed Annotation

Isolated cWS basepair

Broad Annotation

No text annotation

Motif group

IL_82453.1

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

5

Unit IDs

7M4U|1|a|U|1049
7M4U|1|a|G|1050
7M4U|1|a|C|1051
7M4U|1|a|A|1052
7M4U|1|a|U|1053
*
7M4U|1|a|A|1201
7M4U|1|a|U|1202
7M4U|1|a|G|1203

Current chains

Chain a

16s Ribosomal RNA

Nearby chains

Chain c

30S ribosomal protein S3

Chain j

30S ribosomal protein S10

Chain n

30S ribosomal protein S14