IL_7M4V_108

3D structure

PDB id

7M4V (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-Eravacycline complex: 50S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.54 Å

Loop

Sequence

UGUAG*UGAGA

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7M4V_108 not in the Motif Atlas

Homologous match to IL_5J7L_300

Geometric discrepancy: 0.1767

The information below is about IL_5J7L_300

Detailed Annotation

tSH-tWH-tHS

Broad Annotation

No text annotation

Motif group

IL_38862.4

Basepair signature

cWW-cSH-R-tWH-tHS-cWW

Number of instances in this motif group

5

Unit IDs

7M4V|1|A|U|1469
7M4V|1|A|G|1470
7M4V|1|A|U|1471
7M4V|1|A|A|1472
7M4V|1|A|G|1473
*
7M4V|1|A|U|1509
7M4V|1|A|G|1510
7M4V|1|A|A|1511
7M4V|1|A|G|1512
7M4V|1|A|A|1513

Current chains

Chain A

23s ribosomal RNA

Nearby chains