IL_7M4W_001
3D structure
- PDB id
- 7M4W (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- A. baumannii Ribosome-Eravacycline complex: 70S Empty
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.55 Å
Loop
- Sequence
- GUGGAUG*CUGAAAC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7M4W_001 not in the Motif Atlas
- Geometric match to IL_4WF9_001
- Geometric discrepancy: 0.1118
- The information below is about IL_4WF9_001
- Detailed Annotation
- Triple sheared with non-canonical cWW
- Broad Annotation
- Triple sheared
- Motif group
- IL_22311.1
- Basepair signature
- cWW-cWW-tSH-tHS-tHS-L-R-cWW
- Number of instances in this motif group
- 10
Unit IDs
7M4W|1|A|G|31
7M4W|1|A|U|32
7M4W|1|A|G|33
7M4W|1|A|G|34
7M4W|1|A|A|35
7M4W|1|A|U|36
7M4W|1|A|G|37
*
7M4W|1|A|C|509
7M4W|1|A|U|510
7M4W|1|A|G|511
7M4W|1|A|A|512
7M4W|1|A|A|513
7M4W|1|A|A|514
7M4W|1|A|C|515
Current chains
- Chain A
- 23s ribosomal RNA
Nearby chains
- Chain P
- 50S ribosomal protein L20
- Chain R
- 50S ribosomal protein L22
- Chain Z
- 50S ribosomal protein L32
Coloring options: