IL_7M4W_063

3D structure

PDB id

7M4W (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-Eravacycline complex: 70S Empty

Experimental method

ELECTRON MICROSCOPY

Resolution

2.55 Å

Loop

Sequence

UGAUG*CUGAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7M4W_063 not in the Motif Atlas

Homologous match to IL_5J7L_310

Geometric discrepancy: 0.335

The information below is about IL_5J7L_310

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_50730.2

Basepair signature

cWW-tSH-tHS-tHS-cWW

Number of instances in this motif group

19

Unit IDs

7M4W|1|A|U|1716
7M4W|1|A|G|1717
7M4W|1|A|A|1718
7M4W|1|A|U|1719
7M4W|1|A|G|1720
*
7M4W|1|A|C|1732
7M4W|1|A|U|1733
7M4W|1|A|G|1734
7M4W|1|A|A|1735
7M4W|1|A|G|1736

Current chains

Chain A

23s ribosomal RNA

Nearby chains