IL_7M4W_097

3D structure

PDB id

7M4W (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-Eravacycline complex: 70S Empty

Experimental method

ELECTRON MICROSCOPY

Resolution

2.55 Å

Loop

Sequence

UGUAC*GGUAG

Length

10 nucleotides

Bulged bases

7M4W|1|A|U|2685, 7M4W|1|A|A|2686

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7M4W_097 not in the Motif Atlas

Homologous match to IL_4WF9_102

Geometric discrepancy: 0.0989

The information below is about IL_4WF9_102

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_23774.1

Basepair signature

cWW-L-R-L-tHS-cWW

Number of instances in this motif group

11

Unit IDs

7M4W|1|A|U|2683
7M4W|1|A|G|2684
7M4W|1|A|U|2685
7M4W|1|A|A|2686
7M4W|1|A|C|2687
*
7M4W|1|A|G|2714
7M4W|1|A|G|2715
7M4W|1|A|U|2716
7M4W|1|A|A|2717
7M4W|1|A|G|2718

Current chains

Chain A

23s ribosomal RNA

Nearby chains

Chain D

50S ribosomal protein L3

Chain M

50S ribosomal protein L17

Chain O

50S ribosomal protein L19