IL_7M4W_168

3D structure

PDB id

7M4W (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-Eravacycline complex: 70S Empty

Experimental method

ELECTRON MICROSCOPY

Resolution

2.55 Å

Loop

Sequence

CCG*CAAG

Length

7 nucleotides

Bulged bases

7M4W|1|a|C|1397, 7M4W|1|a|A|1500

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7M4W_168 not in the Motif Atlas

Geometric match to IL_5J7L_058

Geometric discrepancy: 0.116

The information below is about IL_5J7L_058

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61438.4

Basepair signature

cWW-L-cWW

Number of instances in this motif group

4

Unit IDs

7M4W|1|a|C|1396
7M4W|1|a|C|1397
7M4W|1|a|G|1398
*
7M4W|1|a|C|1498
7M4W|1|a|A|1499
7M4W|1|a|A|1500
7M4W|1|a|G|1501

Current chains

Chain a

16s Ribosomal RNA

Nearby chains