IL_7M4X_014

3D structure

PDB id

7M4X (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-Eravacycline complex: 70S with P-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.66 Å

Loop

Sequence

CCU*AUG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7M4X_014 not in the Motif Atlas

Geometric match to IL_4WF9_017

Geometric discrepancy: 0.1205

The information below is about IL_4WF9_017

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_71625.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

79

Unit IDs

7M4X|1|A|C|562
7M4X|1|A|C|563
7M4X|1|A|U|564
*
7M4X|1|A|A|573
7M4X|1|A|U|574
7M4X|1|A|G|575

Current chains

Chain A

23s ribosomal RNA

Nearby chains

Chain K

50S ribosomal protein L15

Chain P

50S ribosomal protein L20

Chain Q

50S ribosomal protein L21

Chain Z

50S ribosomal protein L32