IL_7M4X_186
3D structure
- PDB id
- 7M4X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- A. baumannii Ribosome-Eravacycline complex: 70S with P-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.66 Å
Loop
- Sequence
- AGAAU*GGAAU
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7M4X_186 not in the Motif Atlas
- Homologous match to IL_4LFB_065
- Geometric discrepancy: 0.1251
- The information below is about IL_4LFB_065
- Detailed Annotation
- Triple non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_71154.3
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 17
Unit IDs
7M4X|1|a|A|670
7M4X|1|a|G|671
7M4X|1|a|A|672
7M4X|1|a|A|673
7M4X|1|a|U|674
*
7M4X|1|a|G|710
7M4X|1|a|G|711
7M4X|1|a|A|712
7M4X|1|a|A|713
7M4X|1|a|U|714
Current chains
- Chain a
- 16s Ribosomal RNA
Nearby chains
- Chain C
- 50S ribosomal protein L2
- Chain f
- 30S ribosomal protein S6
- Chain k
- 30S ribosomal protein S11
- Chain r
- 30S ribosomal protein S18
- Chain u
- 30S ribosomal protein S21
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