IL_7M4Y_020

3D structure

PDB id

7M4Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-Eravacycline complex: 70S with E-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

UGAAG*UGGAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7M4Y_020 not in the Motif Atlas

Homologous match to IL_7RQB_021

Geometric discrepancy: 0.111

The information below is about IL_7RQB_021

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_56467.8

Basepair signature

cWW-tSH-tSH-tHS-cWW

Number of instances in this motif group

29

Unit IDs

7M4Y|1|A|U|701
7M4Y|1|A|G|702
7M4Y|1|A|A|703
7M4Y|1|A|A|704
7M4Y|1|A|G|705
*
7M4Y|1|A|U|722
7M4Y|1|A|G|723
7M4Y|1|A|G|724
7M4Y|1|A|A|725
7M4Y|1|A|G|726

Current chains

Chain A

23s ribosomal RNA

Nearby chains

Chain C

50S ribosomal protein L2