IL_7M4Y_121
3D structure
- PDB id
- 7M4Y (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- A. baumannii Ribosome-Eravacycline complex: 70S with E-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.5 Å
Loop
- Sequence
- GAUUAG*CGACGAUC
- Length
- 14 nucleotides
- Bulged bases
- 7M4Y|1|a|U|240, 7M4Y|1|a|C|276
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7M4Y_121 not in the Motif Atlas
- Homologous match to IL_4LFB_011
- Geometric discrepancy: 0.1258
- The information below is about IL_4LFB_011
- Detailed Annotation
- Kink-turn with non-sequential stacking
- Broad Annotation
- Kink-turn
- Motif group
- IL_46174.5
- Basepair signature
- cWW-cSS-tSS-L-cWW-tHW-cWW
- Number of instances in this motif group
- 7
Unit IDs
7M4Y|1|a|G|238
7M4Y|1|a|A|239
7M4Y|1|a|U|240
7M4Y|1|a|U|241
7M4Y|1|a|A|242
7M4Y|1|a|G|243
*
7M4Y|1|a|C|273
7M4Y|1|a|G|274
7M4Y|1|a|A|275
7M4Y|1|a|C|276
7M4Y|1|a|G|277
7M4Y|1|a|A|278
7M4Y|1|a|U|279
7M4Y|1|a|C|280
Current chains
- Chain a
- 16s Ribosomal RNA
Nearby chains
- Chain l
- 30S ribosomal protein S12
- Chain q
- 30S ribosomal protein S17
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