IL_7M4Y_181
3D structure
- PDB id
- 7M4Y (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- A. baumannii Ribosome-Eravacycline complex: 70S with E-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.5 Å
Loop
- Sequence
- GAAGG*CCC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7M4Y_181 not in the Motif Atlas
- Geometric match to IL_2OEU_001
- Geometric discrepancy: 0.2723
- The information below is about IL_2OEU_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_24466.1
- Basepair signature
- cWW-L-R-L-cWW-L
- Number of instances in this motif group
- 9
Unit IDs
7M4Y|1|A|G|1842
7M4Y|1|A|A|1843
7M4Y|1|A|A|1844
7M4Y|1|A|G|1845
7M4Y|1|A|G|1846
*
7M4Y|1|A|C|1888
7M4Y|1|A|C|1889
7M4Y|1|A|C|1890
Current chains
- Chain A
- 23s ribosomal RNA
Nearby chains
- Chain C
- 50S ribosomal protein L2
- Chain a
- Small subunit ribosomal RNA; SSU rRNA
- Chain v
- Transfer RNA; tRNA
Coloring options: