IL_7M4Y_182
3D structure
- PDB id
- 7M4Y (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- A. baumannii Ribosome-Eravacycline complex: 70S with E-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.5 Å
Loop
- Sequence
- UUAAUUGAUG*UUGAUCGAAG
- Length
- 20 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7M4Y_182 not in the Motif Atlas
- Homologous match to IL_5J7L_387
- Geometric discrepancy: 0.1102
- The information below is about IL_5J7L_387
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_61249.1
- Basepair signature
- cWW-L-R-L-R-tHS-cWW-cWW-tSH-tHS-cWW-cWW
- Number of instances in this motif group
- 1
Unit IDs
7M4Y|1|A|U|1847
7M4Y|1|A|U|1848
7M4Y|1|A|A|1849
7M4Y|1|A|A|1850
7M4Y|1|A|U|1851
7M4Y|1|A|U|1852
7M4Y|1|A|G|1853
7M4Y|1|A|A|1854
7M4Y|1|A|U|1855
7M4Y|1|A|G|1856
*
7M4Y|1|A|U|1878
7M4Y|1|A|U|1879
7M4Y|1|A|G|1880
7M4Y|1|A|A|1881
7M4Y|1|A|U|1882
7M4Y|1|A|C|1883
7M4Y|1|A|G|1884
7M4Y|1|A|A|1885
7M4Y|1|A|A|1886
7M4Y|1|A|G|1887
Current chains
- Chain A
- 23s ribosomal RNA
Nearby chains
- Chain v
- Transfer RNA; tRNA
Coloring options: