IL_7M4Z_049

3D structure

PDB id

7M4Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-Eravacycline complex: 70S with hpf

Experimental method

ELECTRON MICROSCOPY

Resolution

2.92 Å

Loop

Sequence

CGAUG*CUAAG

Length

10 nucleotides

Bulged bases

7M4Z|1|A|U|1415

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7M4Z_049 not in the Motif Atlas

Homologous match to IL_5J7L_295

Geometric discrepancy: 0.2097

The information below is about IL_5J7L_295

Detailed Annotation

UAA/GAN

Broad Annotation

No text annotation

Motif group

IL_38507.2

Basepair signature

cWW-tWH-L-tHS-cWW

Number of instances in this motif group

16

Unit IDs

7M4Z|1|A|C|1412
7M4Z|1|A|G|1413
7M4Z|1|A|A|1414
7M4Z|1|A|U|1415
7M4Z|1|A|G|1416
*
7M4Z|1|A|C|1575
7M4Z|1|A|U|1576
7M4Z|1|A|A|1577
7M4Z|1|A|A|1578
7M4Z|1|A|G|1579

Current chains

Chain A

23s ribosomal RNA

Nearby chains