IL_7M4Z_058

3D structure

PDB id

7M4Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-Eravacycline complex: 70S with hpf

Experimental method

ELECTRON MICROSCOPY

Resolution

2.92 Å

Loop

Sequence

GAA*UCC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7M4Z_058 not in the Motif Atlas

Homologous match to IL_4WF9_063

Geometric discrepancy: 0.1581

The information below is about IL_4WF9_063

Detailed Annotation

Isolated tWW turn

Broad Annotation

No text annotation

Motif group

IL_67095.2

Basepair signature

cWW-tWW-cWW

Number of instances in this motif group

8

Unit IDs

7M4Z|1|A|G|1661
7M4Z|1|A|A|1662
7M4Z|1|A|A|1663
*
7M4Z|1|A|U|1991
7M4Z|1|A|C|1992
7M4Z|1|A|C|1993

Current chains

Chain A

23s ribosomal RNA

Nearby chains

Chain D

50S ribosomal protein L3

Chain J

50S ribosomal protein L14

Chain O

50S ribosomal protein L19