IL_7M4Z_166

3D structure

PDB id

7M4Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-Eravacycline complex: 70S with hpf

Experimental method

ELECTRON MICROSCOPY

Resolution

2.92 Å

Loop

Sequence

CCG*CAAG

Length

7 nucleotides

Bulged bases

7M4Z|1|a|C|1397, 7M4Z|1|a|A|1500

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7M4Z_166 not in the Motif Atlas

Homologous match to IL_6CZR_165

Geometric discrepancy: 0.1319

The information below is about IL_6CZR_165

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61438.3

Basepair signature

cWW-L-cWW

Number of instances in this motif group

5

Unit IDs

7M4Z|1|a|C|1396
7M4Z|1|a|C|1397
7M4Z|1|a|G|1398
*
7M4Z|1|a|C|1498
7M4Z|1|a|A|1499
7M4Z|1|a|A|1500
7M4Z|1|a|G|1501

Current chains

Chain a

16s Ribosomal RNA

Nearby chains

Chain v

Ribosomal subunit interface protein