IL_7MPI_009

3D structure

PDB id

7MPI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Stm1 bound vacant 80S structure isolated from cbf5-D95A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.05 Å

Loop

Sequence

UUG*CUUUGUAA

Length

11 nucleotides

Bulged bases

7MPI|1|A1|U|249, 7MPI|1|A1|G|251, 7MPI|1|A1|U|252

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7MPI|1|A1|U|168
7MPI|1|A1|U|169
7MPI|1|A1|G|170
*
7MPI|1|A1|C|247
7MPI|1|A1|U|248
7MPI|1|A1|U|249
7MPI|1|A1|U|250
7MPI|1|A1|G|251
7MPI|1|A1|U|252
7MPI|1|A1|A|253
7MPI|1|A1|A|254

Current chains

Chain A1

25S rRNA

Nearby chains

Chain AG

60S ribosomal protein L8-A

Chain AL

60S ribosomal protein L13-A

Chain Ah

60S ribosomal protein L35-A