IL_7MPI_047
3D structure
- PDB id
- 7MPI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Stm1 bound vacant 80S structure isolated from cbf5-D95A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.05 Å
Loop
- Sequence
- UUG*C(A2M)G
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7MPI_047 not in the Motif Atlas
- Homologous match to IL_8C3A_050
- Geometric discrepancy: 0.5652
- The information below is about IL_8C3A_050
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_52767.5
- Basepair signature
- cWW-L-R-cWW
- Number of instances in this motif group
- 28
Unit IDs
7MPI|1|A1|U|1124
7MPI|1|A1|U|1125
7MPI|1|A1|G|1126
*
7MPI|1|A1|C|1132
7MPI|1|A1|A2M|1133
7MPI|1|A1|G|1134
Current chains
- Chain A1
- 25S rRNA
Nearby chains
- Chain A3
- 5S ribosomal RNA; 5S rRNA
- Chain AI
- 60S ribosomal protein L10
- Chain AT
- 60S ribosomal protein L21-A
- Chain Ab
- 60S ribosomal protein L29
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