IL_7MPI_252
3D structure
- PDB id
- 7MPI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Stm1 bound vacant 80S structure isolated from cbf5-D95A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.05 Å
Loop
- Sequence
- GA*UUU
- Length
- 5 nucleotides
- Bulged bases
- 7MPI|1|B5|U|959
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7MPI_252 not in the Motif Atlas
- Geometric match to IL_2OIU_003
- Geometric discrepancy: 0.3461
- The information below is about IL_2OIU_003
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_89505.4
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 117
Unit IDs
7MPI|1|B5|G|868
7MPI|1|B5|A|869
*
7MPI|1|B5|U|958
7MPI|1|B5|U|959
7MPI|1|B5|U|960
Current chains
- Chain B5
- 18S rRNA
Nearby chains
- Chain BN
- 40S ribosomal protein S13
- Chain BW
- 40S ribosomal protein S22-A
- Chain Bb
- 40S ribosomal protein S27-A
Coloring options: