IL_7MPJ_084
3D structure
- PDB id
- 7MPJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Stm1 bound vacant 80S structure isolated from nop1-D243A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- U(PSU)C*GGA
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7MPJ_084 not in the Motif Atlas
- Geometric match to IL_2ET8_001
- Geometric discrepancy: 0.2061
- The information below is about IL_2ET8_001
- Detailed Annotation
- Stack and bulge
- Broad Annotation
- Stack and bulge
- Motif group
- IL_61702.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 6
Unit IDs
7MPJ|1|A1|U|2190
7MPJ|1|A1|PSU|2191
7MPJ|1|A1|C|2192
*
7MPJ|1|A1|G|2315
7MPJ|1|A1|G|2316
7MPJ|1|A1|A|2317
Current chains
- Chain A1
- 25S rRNA
Nearby chains
- Chain AA
- 60S ribosomal protein L2-A
- Chain An
- 60S ribosomal protein L41-A
- Chain Ap
- 60S ribosomal protein L43-A
- Chain B5
- Small subunit ribosomal RNA; SSU rRNA
Coloring options: