IL_7MPJ_137
3D structure
- PDB id
- 7MPJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Stm1 bound vacant 80S structure isolated from nop1-D243A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- UGUAAG*CUGAG
- Length
- 11 nucleotides
- Bulged bases
- 7MPJ|1|A1|G|3369
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7MPJ_137 not in the Motif Atlas
- Homologous match to IL_8C3A_139
- Geometric discrepancy: 0.0752
- The information below is about IL_8C3A_139
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_83162.8
- Basepair signature
- cWW-cWW-tSH-cWW-tHH-L
- Number of instances in this motif group
- 4
Unit IDs
7MPJ|1|A1|U|3332
7MPJ|1|A1|G|3333
7MPJ|1|A1|U|3334
7MPJ|1|A1|A|3335
7MPJ|1|A1|A|3336
7MPJ|1|A1|G|3337
*
7MPJ|1|A1|C|3367
7MPJ|1|A1|U|3368
7MPJ|1|A1|G|3369
7MPJ|1|A1|A|3370
7MPJ|1|A1|G|3371
Current chains
- Chain A1
- 25S rRNA
Nearby chains
- Chain AB
- 60S ribosomal protein L3
- Chain AW
- 60S ribosomal protein L24-A
- Chain Ad
- 60S ribosomal protein L31-A
Coloring options: