IL_7MPJ_140
3D structure
- PDB id
- 7MPJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Stm1 bound vacant 80S structure isolated from nop1-D243A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- CC*GUUG
- Length
- 6 nucleotides
- Bulged bases
- 7MPJ|1|A1|U|3354, 7MPJ|1|A1|U|3355
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7MPJ_140 not in the Motif Atlas
- Homologous match to IL_8C3A_142
- Geometric discrepancy: 0.2781
- The information below is about IL_8C3A_142
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_82107.1
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 34
Unit IDs
7MPJ|1|A1|C|3349
7MPJ|1|A1|C|3350
*
7MPJ|1|A1|G|3353
7MPJ|1|A1|U|3354
7MPJ|1|A1|U|3355
7MPJ|1|A1|G|3356
Current chains
- Chain A1
- 25S rRNA
Nearby chains
- Chain AU
- 60S ribosomal protein L22-A
- Chain BI
- 40S ribosomal protein S8-A
Coloring options: