IL_7MPJ_157
3D structure
- PDB id
- 7MPJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Stm1 bound vacant 80S structure isolated from nop1-D243A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- UAUAAG*UGAAA
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7MPJ_157 not in the Motif Atlas
- Geometric match to IL_4V88_390
- Geometric discrepancy: 0.0933
- The information below is about IL_4V88_390
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_87517.1
- Basepair signature
- cWW-L-R-L-R-tHS-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
7MPJ|1|B5|U|64
7MPJ|1|B5|A|65
7MPJ|1|B5|U|66
7MPJ|1|B5|A|67
7MPJ|1|B5|A|68
7MPJ|1|B5|G|69
*
7MPJ|1|B5|U|82
7MPJ|1|B5|G|83
7MPJ|1|B5|A|84
7MPJ|1|B5|A|85
7MPJ|1|B5|A|86
Current chains
- Chain B5
- 18S rRNA
Nearby chains
- Chain BG
- 40S ribosomal protein S6-A
- Chain BY
- 40S ribosomal protein S24-A
Coloring options: