IL_7MPJ_227
3D structure
- PDB id
- 7MPJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Stm1 bound vacant 80S structure isolated from nop1-D243A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- CCG*CAAG
- Length
- 7 nucleotides
- Bulged bases
- 7MPJ|1|B5|C|1637, 7MPJ|1|B5|A|1766
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7MPJ_227 not in the Motif Atlas
- Geometric match to IL_5J7L_058
- Geometric discrepancy: 0.1053
- The information below is about IL_5J7L_058
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_61438.4
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 4
Unit IDs
7MPJ|1|B5|C|1636
7MPJ|1|B5|C|1637
7MPJ|1|B5|G|1638
*
7MPJ|1|B5|C|1764
7MPJ|1|B5|A|1765
7MPJ|1|B5|A|1766
7MPJ|1|B5|G|1767
Current chains
- Chain B5
- 18S rRNA
Nearby chains
- Chain Ba
- 40S ribosomal protein S26-A
- Chain Bh
- Suppressor protein STM1
Coloring options: