IL_7MQ8_024

3D structure

PDB id

7MQ8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human SSU processome, state pre-A1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CAUU*ACCUCGGG

Length

12 nucleotides

Bulged bases

7MQ8|1|L1|G|307

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7MQ8|1|L1|C|216
7MQ8|1|L1|A|217
7MQ8|1|L1|U|218
7MQ8|1|L1|U|219
*
7MQ8|1|L1|A|302
7MQ8|1|L1|C|303
7MQ8|1|L1|C|304
7MQ8|1|L1|U|305
7MQ8|1|L1|C|306
7MQ8|1|L1|G|307
7MQ8|1|L1|G|308
7MQ8|1|L1|G|309

Current chains

Chain L1

18S rRNA

Nearby chains

Chain L4

40S ribosomal protein S4, X isoform

Chain L8

40S ribosomal protein S8

Chain SP

Small subunit processome component 20 homolog